BLASTP 2.0.10 [Aug-26-1999]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|120589|sp|P10901|FUCO_DICDI ALPHA-L-FUCOSIDASE
PRECURSOR (ALPHA-L-FUCOSIDE FUCOHYDROLASE).
(461 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
425,089 sequences; 130,475,837 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Score E
Sequences producing significant alignments: (bits) Value
sp|P10901|FUCO_DICDI ALPHA-L-FUCOSIDASE PRECURSOR (ALPHA-L-... 961 0.0
sp|P04066|FUCO_HUMAN TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (A... 404 e-112
pir||S10235 alpha-L-fucosidase (EC 3.2.1.51) precursor - rat 403 e-111
sp|P17164|FUCO_RAT TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (ALP... 403 e-111
ref|NP_000138.1|PFUCA1| fucosidase, alpha-L- 1, tissue >gi|... 400 e-110
gi|1143065 (U29765) alpha-L-fucosidase [Canis familiaris] 391 e-108
sp|P48300|FUCO_CANFA TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (A... 385 e-106
emb|CAA63197| (X92448) alpha-L-fucosidase [Canis familiaris] 383 e-105
emb|CAB53746.1| (AL031320) dJ20N2.5 (novel protein similar ... 370 e-101
pir||I84457 alpha-L-fucosidase - human (fragment) >gi|18279... 339 4e-92
sp|P49713|FUCO_CAEEL PUTATIVE ALPHA-L-FUCOSIDASE PRECURSOR ... 332 4e-90
gb|AAD35394.1|AE001712_7 (AE001712) alpha-L-fucosidase, put... 238 9e-62
emb|CAB54164.1| (AL110470) putative glycosyl hydrolase [Str... 149 5e-35
gi|1143067 (U29766) alpha-L-fucosidase [Canis familiaris] 90 4e-17
gi|4063748 (AC005851) unknown protein [Arabidopsis thaliana] 57 3e-07
gi|4096756 (U39394) alpha-1,3/4-fucosidase precursor [Strep... 56 7e-07
gb|AAC33391| (U20246) vrlC [Dichelobacter nodosus] 39 0.10
pir||I37394 alpha-L-fucosidase - human (fragment) >gi|13350... 38 0.13
gb|AAD13302.1| (AF119040) NL0C [Lycopersicon esculentum] 34 3.4
gb|AAD36579.1|AE001799_11 (AE001799) sun protein [Thermotog... 32 7.6
emb|CAA22438| (AL034463) tRNA-splicing endonuclease positiv... 32 7.6
sp|P31327|CPSM_HUMAN CARBAMOYL-PHOSPHATE SYNTHASE [AMMONIA]... 32 7.6
emb|CAA16319.1| (AL021479) predicted using Genefinder; cDNA... 32 7.6
emb|CAA05275| (AJ002236) Hcr9-9D [Lycopersicon pimpinellifo... 32 7.6
gnl|NCBI_MITO|ND4_11653 NADH dehydrogenase subunit 4 >gi|24... 32 7.6
sp|P55332|XYN1_EMENI ENDO-1,4-BETA-XYLANASE 1 PRECURSOR (XY... 32 7.6
ref|NP_001866.1|PCPS1| carbamoyl-phosphate synthetase 1, mi... 32 7.6
sp|P28800|A2AP_BOVIN ALPHA-2-ANTIPLASMIN PRECURSOR (ALPHA-2... 32 7.6
sp|Q27459|ACE1_CAEBR ACETYLCHOLINESTERASE 1 PRECURSOR (ACHE... 32 9.9
pir||BYEBT sulfate-binding protein - Salmonella typhimurium 32 9.9
sp|P55334|XYN1_HUMIN ENDO-1,4-BETA-XYLANASE 1 PRECURSOR (XY... 32 9.9
pir||S40860 periplasmic sulphate binding protein - Escheric... 32 9.9
sp|P10901|FUCO_DICDI ALPHA-L-FUCOSIDASE PRECURSOR (ALPHA-L-FUCOSIDE FUCOHYDROLASE)
>gi|84089|pir||A30364 alpha-L-fucosidase (EC 3.2.1.51)
homolog precursor - slime mold (Dictyostelium
discoideum) >gi|7171|emb|CAA68800| (Y07497) fucosidase
[Dictyostelium discoideum] >gi|226317|prf||1506344A
developmentally regulated gene [Dictyostelium
discoideum]
Length = 461
Score = 961 bits (2457), Expect = 0.0
Identities = 448/461 (97%), Positives = 448/461 (97%)
Query: 1 MKMXXXXXXXXXXXXXKSQQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGG 60
MKM KSQQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGG
Sbjct: 1 MKMIIIFFILLILNLIKSQQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGG 60
Query: 61 YAEWYWWTLKNPSSDGGATQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAK 120
YAEWYWWTLKNPSSDGGATQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAK
Sbjct: 61 YAEWYWWTLKNPSSDGGATQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAK 120
Query: 121 YVVLTSKHHEGYTLWNSEQSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFN 180
YVVLTSKHHEGYTLWNSEQSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFN
Sbjct: 121 YVVLTSKHHEGYTLWNSEQSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFN 180
Query: 181 PLYLADAETGKNPTTQVYVDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSW 240
PLYLADAETGKNPTTQVYVDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSW
Sbjct: 181 PLYLADAETGKNPTTQVYVDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSW 240
Query: 241 LYTNSSVKDTVIVNDRWGSECRDKNGGFYTGADHFNPYKLQSHKWENCATIGYSYGYDEY 300
LYTNSSVKDTVIVNDRWGSECRDKNGGFYTGADHFNPYKLQSHKWENCATIGYSYGYDEY
Sbjct: 241 LYTNSSVKDTVIVNDRWGSECRDKNGGFYTGADHFNPYKLQSHKWENCATIGYSYGYDEY 300
Query: 301 EQATDYQNATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESI 360
EQATDYQNATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESI
Sbjct: 301 EQATDYQNATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESI 360
Query: 361 YGSSPWRVQNMTFNIWYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGE 420
YGSSPWRVQNMTFNIWYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGE
Sbjct: 361 YGSSPWRVQNMTFNIWYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGE 420
Query: 421 KGVEVSLPIESTKPGITLNIPMVAPQDYPPYVYVFRLTDVE 461
KGVEVSLPIESTKPGITLNIPMVAPQDYPPYVYVFRLTDVE
Sbjct: 421 KGVEVSLPIESTKPGITLNIPMVAPQDYPPYVYVFRLTDVE 461
sp|P04066|FUCO_HUMAN TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (ALPHA-L-FUCOSIDASE I)
(ALPHA-L-FUCOSIDE FUCOHYDROLASE) >gi|182788 (M80815)
alpha-L-fucosidase [Homo sapiens]
Length = 461
Score = 404 bits (1027), Expect = e-112
Identities = 197/449 (43%), Positives = 274/449 (60%), Gaps = 23/449 (5%)
Query: 19 QQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGA 78
++Y P W ++SRPLP W+D+ KFG+FIH+G++SVPA+ + EW+WW +
Sbjct: 30 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGS----EWFWWHWQGEGRP--Q 83
Query: 79 TQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSE 138
QR+ + F+Y DF +F R F EWA + + +GAKYVVLT+KHHEG+T W S
Sbjct: 84 YQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSP 143
Query: 139 QSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPLYLADAETGKNPTTQVY 198
SWNWNS + GP D+VGEL +++ + GLYHSL EWF+PLYL D + G TQ +
Sbjct: 144 VSWNWNSKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLYLLDKKNGFK--TQHF 201
Query: 199 VDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWG 258
V M +L D+V +Y+P+LIW+DG+W YW ST FLSWLY +S VKD V+VNDRWG
Sbjct: 202 VSAKTMPELYDLVNSYKPDLIWSDGEWECPDTYWNSTNFLSWLYNDSPVKDEVVVNDRWG 261
Query: 259 SECRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQNATELIIDLV 317
C +GG+Y D F P L HKWE C +I +S+GY +D +E+I +LV
Sbjct: 262 QNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMALSDVTEESEIISELV 321
Query: 318 TTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQ--NMTFNI 375
TV+ GGN+LL++GP G I +RLL +G WLSIN E+IY S PWRVQ T ++
Sbjct: 322 QTVSLGGNYLLNIGPTKDGLIVPIFQERLLAVGKWLSINGEAIYASKPWRVQWEKNTTSV 381
Query: 376 WYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGEKGVEVSLPIESTKP- 434
WYT+ VYA P++GVL L PI + T+ T+LG++G+ ST P
Sbjct: 382 WYTSK--GSAVYAIFLHWPENGVLNLESPITTSTTKITMLGIQGDLK-------WSTDPD 432
Query: 435 -GITLNIPMVAPQDYP-PYVYVFRLTDVE 461
G+ +++P + P P + + +LT V+
Sbjct: 433 KGLFISLPQLPPSAVPAEFAWTIKLTGVK 461
pir||S10235 alpha-L-fucosidase (EC 3.2.1.51) precursor - rat
Length = 462
Score = 403 bits (1024), Expect = e-111
Identities = 196/445 (44%), Positives = 274/445 (61%), Gaps = 21/445 (4%)
Query: 21 YGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGATQ 80
Y P W ++SRPLP W+D+ KFG+F+H+G+YSVPA+ + EW+WW + S A
Sbjct: 33 YTPDWPSLDSRPLPRWFDEAKFGLFVHWGVYSVPAWGS----EWFWWHWQGEQSS--AYV 86
Query: 81 RYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSEQS 140
R+ ++ + F+Y DF +F R F EWA + + +GAKYVVLT+KHHEG+T W S S
Sbjct: 87 RFMKENYPPGFSYADFAPQFTARFFHPEEWADLFQAAGAKYVVLTAKHHEGFTNWPSAVS 146
Query: 141 WNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPLYLADAETGKNPTTQVYVD 200
WNWNS + GP D+VGEL +V+ + GLYHSLFEWF+PLYL D + G TQ +V
Sbjct: 147 WNWNSKDVGPHRDLVGELGAAVRKRNIRYGLYHSLFEWFHPLYLLDKKNGLK--TQHFVS 204
Query: 201 EILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWGSE 260
M +L D+V Y+P+LIW+DG+W +YW STEFL+WLY S VKD V+VNDRWG
Sbjct: 205 TKTMPELYDLVNRYKPDLIWSDGEWECPDSYWNSTEFLAWLYNESPVKDQVVVNDRWGQN 264
Query: 261 CRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQNATELIIDLVTT 319
C ++GG+Y D + P+ L HKWE C ++ S+GY + + E+I +LV T
Sbjct: 265 CSCRHGGYYNCEDKYRPHSLPDHKWEMCTSVDKASWGYRRDMSMSTIVDENEIIEELVQT 324
Query: 320 VACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQ---NMTFNIW 376
++ GGN+LL++GP+ G I +RLL +G WL IN E+IY S PWRVQ N T +W
Sbjct: 325 ISLGGNYLLNIGPNKDGVIVPIFQERLLAVGKWLQINGEAIYASKPWRVQSEKNKTV-VW 383
Query: 377 YTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGEKGVEVSLPIESTKPGI 436
YTT + VYA P+DGV+ L P + T+ T+LG++GE P+E G+
Sbjct: 384 YTTK--DSAVYATFLHWPEDGVVNLQSPKMTSATKITMLGMEGELHWTQD-PLE----GV 436
Query: 437 TLNIPMVAPQDYP-PYVYVFRLTDV 460
+ +P + P +P + +LT V
Sbjct: 437 LITLPQLPPGTFPVESAWTLKLTKV 461
sp|P17164|FUCO_RAT TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (ALPHA-L-FUCOSIDASE I)
(ALPHA-L-FUCOSIDE FUCOHYDROLASE) >gi|55651|emb|CAA34268|
(X16145) precursor polypeptide (AA -28 to 434) [Rattus
norvegicus]
Length = 462
Score = 403 bits (1024), Expect = e-111
Identities = 196/445 (44%), Positives = 274/445 (61%), Gaps = 21/445 (4%)
Query: 21 YGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGATQ 80
Y P W ++SRPLP W+D+ KFG+F+H+G+YSVPA+ + EW+WW + S A
Sbjct: 33 YTPDWPSLDSRPLPRWFDEAKFGLFVHWGVYSVPAWGS----EWFWWHWQGEQSS--AYV 86
Query: 81 RYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSEQS 140
R+ ++ + F+Y DF +F R F EWA + + +GAKYVVLT+KHHEG+T W S S
Sbjct: 87 RFMKENYPPGFSYADFAPQFTARFFHPEEWADLFQAAGAKYVVLTAKHHEGFTNWPSAVS 146
Query: 141 WNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPLYLADAETGKNPTTQVYVD 200
WNWNS + GP D+VGEL +V+ + GLYHSLFEWF+PLYL D + G TQ +V
Sbjct: 147 WNWNSKDVGPHRDLVGELGAAVRKRNIRYGLYHSLFEWFHPLYLLDKKNGLK--TQHFVS 204
Query: 201 EILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWGSE 260
M +L D+V Y+P+LIW+DG+W +YW STEFL+WLY S VKD V+VNDRWG
Sbjct: 205 TKTMPELYDLVNRYKPDLIWSDGEWECPDSYWNSTEFLAWLYNESPVKDQVVVNDRWGQN 264
Query: 261 CRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQNATELIIDLVTT 319
C ++GG+Y D + P+ L HKWE C ++ S+GY + + E+I +LV T
Sbjct: 265 CSCRHGGYYNCEDKYRPHSLPDHKWEMCTSVDKASWGYRRDMSMSTIVDENEIIEELVQT 324
Query: 320 VACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQ---NMTFNIW 376
++ GGN+LL++GP+ G I +RLL +G WL IN E+IY S PWRVQ N T +W
Sbjct: 325 ISLGGNYLLNIGPNKDGVIVPIFQERLLAVGKWLQINGEAIYASKPWRVQSERNKTV-VW 383
Query: 377 YTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGEKGVEVSLPIESTKPGI 436
YTT + VYA P+DGV+ L P + T+ T+LG++GE P+E G+
Sbjct: 384 YTTK--DSAVYATFLHWPEDGVVNLQSPKMTSATKITMLGMEGELHWTQD-PLE----GV 436
Query: 437 TLNIPMVAPQDYP-PYVYVFRLTDV 460
+ +P + P +P + +LT V
Sbjct: 437 LITLPQLPPGTFPVESAWTLKLTKV 461
ref|NP_000138.1|PFUCA1| fucosidase, alpha-L- 1, tissue >gi|67502|pir||HWHUFA
alpha-L-fucosidase (EC 3.2.1.51) 1 precursor, tissue -
human >gi|178409 (M29877) alpha-L-fucosidase precursor
(EC 3.2.1.5) [Homo sapiens]
Length = 461
Score = 400 bits (1017), Expect = e-110
Identities = 196/449 (43%), Positives = 273/449 (60%), Gaps = 23/449 (5%)
Query: 19 QQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGA 78
++Y P W ++SRPLP W+D+ KFG+FIH+G++SVPA+ + EW+WW +
Sbjct: 30 RRYTPDWPSLDSRPLPAWFDEAKFGVFIHWGVFSVPAWGS----EWFWWHWQGEGRP--Q 83
Query: 79 TQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSE 138
QR+ + F+Y DF +F R F EWA + + +GAKYVVLT+KHHEG+T W S
Sbjct: 84 YQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSP 143
Query: 139 QSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPLYLADAETGKNPTTQVY 198
SWNWNS + GP D+VGEL +++ + GLYHSL EWF+PLYL D + G TQ +
Sbjct: 144 VSWNWNSKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPLYLLDKKNGFK--TQHF 201
Query: 199 VDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWG 258
V M +L D+V +Y+P+LIW+DG+W YW ST FLSWLY +S VKD V+VNDRWG
Sbjct: 202 VSAKTMPELYDLVNSYKPDLIWSDGEWECPDTYWNSTNFLSWLYNDSPVKDEVVVNDRWG 261
Query: 259 SECRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQNATELIIDLV 317
+GG+Y D F P L HKWE C +I +S+GY +D +E+I +LV
Sbjct: 262 QNSSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMALSDVTEESEIISELV 321
Query: 318 TTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQ--NMTFNI 375
TV+ GGN+LL++GP G I +RLL +G WLSIN E+IY S PWRVQ T ++
Sbjct: 322 QTVSLGGNYLLNIGPTKDGLIVPIFQERLLAVGKWLSINGEAIYASKPWRVQWEKNTTSV 381
Query: 376 WYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGEKGVEVSLPIESTKP- 434
WYT+ VYA P++GVL L PI + T+ T+LG++G+ ST P
Sbjct: 382 WYTSK--GSAVYAIFLHWPENGVLNLESPITTSTTKITMLGIQGDLK-------WSTDPD 432
Query: 435 -GITLNIPMVAPQDYP-PYVYVFRLTDVE 461
G+ +++P + P P + + +LT V+
Sbjct: 433 KGLFISLPQLPPSAVPAEFAWTIKLTGVK 461
gi|1143065 (U29765) alpha-L-fucosidase [Canis familiaris]
Length = 466
Score = 391 bits (995), Expect = e-108
Identities = 190/447 (42%), Positives = 270/447 (59%), Gaps = 20/447 (4%)
Query: 19 QQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGA 78
++Y P W ++SRPLP W+D KFG+F+H+G+++VPA+ + EW+WW K
Sbjct: 36 RRYTPDWQSLDSRPLPDWFDKAKFGVFVHWGVFAVPAWGS----EWFWWHWKGEGLP--Q 89
Query: 79 TQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSE 138
+++ + + F+Y DF +F R F + WA + + +GA+YVVLT+KHHEG+T W S
Sbjct: 90 YEQFMSENYPPGFSYADFGPQFTARFFHPDTWADLFQAAGARYVVLTTKHHEGFTNWPSS 149
Query: 139 QSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPLYLADAETGKNPTTQVY 198
SWNWNS + GP D+VGEL ++++ + GLYHSL EWF+PLYL D + N TQ +
Sbjct: 150 VSWNWNSNDVGPHRDLVGELGRALRKRNIRYGLYHSLLEWFHPLYLLDKK--NNFKTQFF 207
Query: 199 VDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWG 258
V M +L D+V YEP+LIW+DG+W YW STEFLSWLY +S VKD V+VNDRWG
Sbjct: 208 VRAKTMPELYDLVNRYEPDLIWSDGEWECPDTYWNSTEFLSWLYNDSPVKDHVVVNDRWG 267
Query: 259 SECRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQNATELIIDLV 317
C +GG+Y D + P L HKWE C +I S+GY +D + E+I +LV
Sbjct: 268 QNCSCHHGGYYNCQDKYKPESLPDHKWEMCTSIDKVSWGYRRNMVMSDVASECEIISELV 327
Query: 318 TTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQ--NMTFNI 375
TV+ GGN+LL++GP G I +RLL IG WLSIN E+IY S PWRVQ T ++
Sbjct: 328 QTVSLGGNYLLNIGPTKDGLIVPIFQERLLSIGKWLSINGEAIYASKPWRVQLEKNTTSV 387
Query: 376 WYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGEKGVEVSLPIESTKPG 435
WYT+ VYA P++GVL L P+ + T+ T+L G++ L + G
Sbjct: 388 WYTSR--GMTVYAIFLRWPENGVLSLKSPVTTSTTQITML------GIQKDLKWSTEPEG 439
Query: 436 ITLNIPMVAPQDYP-PYVYVFRLTDVE 461
+ + +P ++ P + + +LT VE
Sbjct: 440 LLIYLPQLSLFTLPVEFGWTIKLTGVE 466
sp|P48300|FUCO_CANFA TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (ALPHA-L-FUCOSIDASE I)
(ALPHA-L-FUCOSIDE FUCOHYDROLASE)
>gi|1429317|emb|CAA63362| (X92671) alpha-L-fucosidase
[Canis familiaris]
Length = 465
Score = 385 bits (979), Expect = e-106
Identities = 189/447 (42%), Positives = 268/447 (59%), Gaps = 20/447 (4%)
Query: 19 QQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGA 78
++Y P W ++SRPLP W+D KFG+F+H+G ++VPA+ + EW+WW K
Sbjct: 35 RRYTPDWQSLDSRPLPDWFDKAKFGVFVHWGEFAVPAWGS----EWFWWHWKGEGLP--Q 88
Query: 79 TQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSE 138
+++ + + F+Y DF +F R F + WA + + +GA+YVVLT+KHHEG+T W S
Sbjct: 89 YEQFMSENYPPGFSYADFGPQFTARFFHPDTWADLFQAAGARYVVLTTKHHEGFTNWPSS 148
Query: 139 QSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPLYLADAETGKNPTTQVY 198
SWNWNS + GP D+VGEL ++++ + GLYHSL EWF+PLYL D + N TQ +
Sbjct: 149 VSWNWNSNDVGPHRDLVGELGRALRKRNIRYGLYHSLLEWFHPLYLLDKK--NNFKTQFF 206
Query: 199 VDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWG 258
V M +L D+V YEP+LIW+DG+W YW STEFLSWLY +S VKD V+VNDRWG
Sbjct: 207 VRAKTMPELYDLVNRYEPDLIWSDGEWKCPDTYWNSTEFLSWLYNDSPVKDHVVVNDRWG 266
Query: 259 SECRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQNATELIIDLV 317
C +GG+Y D + P L KWE C +I S+GY +D + E+I +LV
Sbjct: 267 QNCSCHHGGYYNCQDKYKPESLPDLKWEMCTSIDKVSWGYRRNMVMSDVASECEIISELV 326
Query: 318 TTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQ--NMTFNI 375
TV+ GGN+LL++GP G I +RLL IG WLSIN E+IY S PWRVQ T ++
Sbjct: 327 QTVSLGGNYLLNIGPTKDGLIVPIFQERLLSIGKWLSINGEAIYASKPWRVQLEKNTTSV 386
Query: 376 WYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGEKGVEVSLPIESTKPG 435
WYT+ VYA P++GVL L P+ + T+ T+L G++ L + G
Sbjct: 387 WYTSR--GMTVYAIFLRWPENGVLSLKSPVTTSTTQITML------GIQKDLKWSTEPEG 438
Query: 436 ITLNIPMVAPQDYP-PYVYVFRLTDVE 461
+ + +P ++ P + + +LT VE
Sbjct: 439 LLIYLPQLSLFTLPVEFGWTIKLTGVE 465
emb|CAA63197| (X92448) alpha-L-fucosidase [Canis familiaris]
Length = 465
Score = 383 bits (972), Expect = e-105
Identities = 188/447 (42%), Positives = 267/447 (59%), Gaps = 20/447 (4%)
Query: 19 QQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGA 78
++Y P W ++SRPLP W+D KFG+F+H+G ++VPA+ + EW+WW K
Sbjct: 35 RRYTPDWQSLDSRPLPDWFDKAKFGVFVHWGEFAVPAWGS----EWFWWHWKGEGLP--Q 88
Query: 79 TQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSE 138
+++ + + F+Y DF +F R F + WA + + +GA+YVVLT+KHHEG+T W S
Sbjct: 89 YEQFMSENYPPGFSYADFGPQFTARFFHPDTWADLFQAAGARYVVLTTKHHEGFTNWPSS 148
Query: 139 QSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPLYLADAETGKNPTTQVY 198
SWNWNS + GP D+VGEL ++++ + GLYHSL EWF+PLYL D + N TQ +
Sbjct: 149 VSWNWNSNDVGPHRDLVGELGRALRKRNIRYGLYHSLLEWFHPLYLLDKK--NNFKTQFF 206
Query: 199 VDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWG 258
V M +L D+V YEP+LIW+DG+W YW STEFLSWLY +S VK V+VNDRWG
Sbjct: 207 VRAKTMPELYDLVNRYEPDLIWSDGEWKCPDTYWNSTEFLSWLYNDSPVKGHVVVNDRWG 266
Query: 259 SECRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQNATELIIDLV 317
C +GG+Y D + P L KWE C +I S+GY +D + E+I +LV
Sbjct: 267 QNCSCHHGGYYNCQDKYKPESLPDLKWEMCTSIDKVSWGYRRNMVMSDVASECEIISELV 326
Query: 318 TTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQ--NMTFNI 375
TV+ GGN+LL++GP G I +RLL IG WLSIN E+IY S PWRVQ T ++
Sbjct: 327 QTVSLGGNYLLNIGPTKDGLIVPIFQERLLSIGKWLSINGEAIYASKPWRVQLEKNTTSV 386
Query: 376 WYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGLKGEKGVEVSLPIESTKPG 435
WYT+ VYA P++GVL L P+ + T+ T+L G++ L + G
Sbjct: 387 WYTSR--GMTVYAIFLRWPENGVLSLKSPVTTSTTQITML------GIQKDLKWSTEPEG 438
Query: 436 ITLNIPMVAPQDYP-PYVYVFRLTDVE 461
+ + +P ++ P + + +LT VE
Sbjct: 439 LLIYLPQLSLFTLPVEFGWTIKLTGVE 465
emb|CAB53746.1| (AL031320) dJ20N2.5 (novel protein similar to fucosidase,
alpha-L-1, tissue (EC 3.2.1.51, alpha-l-fucosidase
fucohydrolase)) [Homo sapiens]
Length = 467
Score = 370 bits (941), Expect = e-101
Identities = 191/447 (42%), Positives = 269/447 (59%), Gaps = 19/447 (4%)
Query: 20 QYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGAT 79
++ PTW+ +++R LP W+D KFGIFIH+G++SVP+F + EW+WW +
Sbjct: 33 RFDPTWESLDARQLPAWFDQAKFGIFIHWGVFSVPSFGS----EWFWWYWQKEKIPKYV- 87
Query: 80 QRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSEQ 139
+ + + +F Y+DF F + F+AN+WA I + SGAKY+VLTSKHHEG+TLW SE
Sbjct: 88 -EFMKDNYPPSFKYEDFGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEY 146
Query: 140 SWNWNSVETGPGIDIVGELTKSVKNM-GLHMGLYHSLFEWFNPLYLADAETGKNPTTQVY 198
SWNWN+++ GP DIV EL +++N L GLY+SLFEWF+PL+L D E+ Q
Sbjct: 147 SWNWNAIDEGPKRDIVKELEVAIRNRTDLRFGLYYSLFEWFHPLFLED-ESSSFHKRQFP 205
Query: 199 VDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWG 258
V + L +L ++V Y+PE++W+DGD YW ST FL+WLY S V+ TV+ NDRWG
Sbjct: 206 VSKTL-PELYELVNNYQPEVLWSDGDGGAPDQYWNSTGFLAWLYNESPVRGTVVTNDRWG 264
Query: 259 SECRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQNATELIIDLV 317
+ K+GGFYT +D +NP L HKWENC TI S+GY +DY EL+ LV
Sbjct: 265 AGSICKHGGFYTCSDRYNPGHLLPHKWENCMTIDKLSWGYRREAGISDYLTIEELVKQLV 324
Query: 318 TTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQN--MTFNI 375
TV+CGGN L+++GP GTI +RL ++G+WL +N E+IY + WR QN +T ++
Sbjct: 325 ETVSCGGNLLMNIGPTLDGTISVVFEERLRQMGSWLKVNGEAIYETHTWRSQNDTVTPDV 384
Query: 376 WYTTNTTNGNVYAFVFELPDDGVLILSDPIG-NNKTEATLLGLKGEKGVEVSLPIESTKP 434
WYT+ VYA + P G L L P TE LLG G+ +SL +
Sbjct: 385 WYTSKPKEKLVYAIFLKWPTSGQLFLGHPKAILGATEVKLLG-HGQPLNWISL----EQN 439
Query: 435 GITLNIPMVAPQDYP-PYVYVFRLTDV 460
GI + +P + P + + LT+V
Sbjct: 440 GIMVELPQLTIHQMPCKWGWALALTNV 466
pir||I84457 alpha-L-fucosidase - human (fragment) >gi|182790 (M10355) alpha-L
fucosidase [Homo sapiens]
Length = 353
Score = 339 bits (859), Expect = 4e-92
Identities = 164/358 (45%), Positives = 218/358 (60%), Gaps = 9/358 (2%)
Query: 63 EWYWWTLKNPSSDGGATQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYV 122
E+ WW + QR+ + F+Y DF +F R F EWA + + +GAKYV
Sbjct: 1 EFLWWHWQGEGRP--QYQRFMRDNYPPGFSYADFGPQFTARFFHPEEWADLFQAAGAKYV 58
Query: 123 VLTSKHHEGYTLWNSEQSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPL 182
VLT+KHHEG+T W S SWNWNS + GP D+VGEL +++ + GLYHSL EWF+PL
Sbjct: 59 VLTTKHHEGFTNWPSPVSWNWNSKDVGPHRDLVGELGTALRKRNIRYGLYHSLLEWFHPL 118
Query: 183 YLADAETGKNPTTQVYVDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLY 242
YL D + G TQ +V M +L D+V +Y+P+LIW+DG+W YW ST FLSWLY
Sbjct: 119 YLLDKKNGFK--TQHFVSAKTMPELYDLVNSYKPDLIWSDGEWECPDTYWNSTNFLSWLY 176
Query: 243 TNSSVKDTVIVNDRWGSECRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYE 301
+S VKD V+VNDRWG C +GG+Y D F P L HKWE C +I +S+GY
Sbjct: 177 NDSPVKDEVVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDM 236
Query: 302 QATDYQNATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIY 361
+D +E+I +LV TV+ GGN+LL++GP G I +RLL +G WLSIN E+IY
Sbjct: 237 ALSDVTEESEIISELVQTVSLGGNYLLNIGPTKDGLIVPIFQERLLAVGKWLSINGEAIY 296
Query: 362 GSSPWRVQ--NMTFNIWYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNKTEATLLGL 417
S PWRVQ T ++WYT+ VYA P++GVL L PI + T+ T+LG+
Sbjct: 297 ASKPWRVQWEKNTTSVWYTSK--GSAVYAIFLHWPENGVLNLESPITTSTTKITMLGI 352
sp|P49713|FUCO_CAEEL PUTATIVE ALPHA-L-FUCOSIDASE PRECURSOR (ALPHA-L-FUCOSIDE
FUCOHYDROLASE) >gi|3880481|emb|CAA91546.1| (Z67738)
similar to alpha-L-fucosidase precursor [Caenorhabditis
elegans]
Length = 407
Score = 332 bits (842), Expect = 4e-90
Identities = 167/371 (45%), Positives = 228/371 (61%), Gaps = 19/371 (5%)
Query: 21 YGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGY---AEWYWWTLKNPSSDGG 77
Y P W+ +++RPLP WYDD KFGIF H+G+YS N Y +EW WW K D
Sbjct: 18 YTPDWESLDNRPLPSWYDDSKFGIFCHWGLYSDDNDKNKKYKTRSEWMWWYWKGTQPDKD 77
Query: 78 ATQRYHEKEFGANFTYQDFVSRFDCRLFDA--NEWASIIEKSGAK------YVVLTSKHH 129
+ +K + TY DF L A +++ S+ + + Y V TSKHH
Sbjct: 78 VVN-FVDKNYKPGTTYADFAKDVCNILLFAIESDFCSLPQSISMRINLLKLYFVFTSKHH 136
Query: 130 EGYTLWNSEQSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSLFEWFNPLYLADAET 189
EG+T+W S SWNWNS++ GP DIVGEL + K +H GLY S FEWF+P++L D
Sbjct: 137 EGFTMWPSRTSWNWNSMDIGPKRDIVGELRDAFKKTDVHFGLYFSQFEWFHPMFLDD--- 193
Query: 190 GKNPTTQVYVDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKD 249
GK TT Y +++ Q+ DIVT Y PE++W+DG+W + +YWK+ EFL+WLY +S VKD
Sbjct: 194 GKFNTT-FYPEQVSYPQMIDIVTKYNPEVVWSDGEWDKSDDYWKAKEFLAWLYNSSPVKD 252
Query: 250 TVIVNDRWGSECRDKNGGFYTGADHFNPYKLQSHKWENCATIG-YSYGYDEYEQATDYQN 308
V+VNDRWG+ K+GGF T +DH++P KL KWENC T+ +S+G +A++
Sbjct: 253 QVVVNDRWGTGTMGKHGGFMTYSDHYDPGKLLEKKWENCMTLDKHSWGNRRDMKASEVNT 312
Query: 309 ATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRV 368
A E+I L T+AC GN LL+VGP+ G IP DRL EIG +++I SE+I+G+ PW
Sbjct: 313 AYEIIEQLARTIACNGNLLLNVGPNMHGQIPAIFEDRLEEIGRFVNITSEAIFGTRPWIH 372
Query: 369 QNMT--FNIWY 377
QN T N+WY
Sbjct: 373 QNDTSASNVWY 383
gb|AAD35394.1|AE001712_7 (AE001712) alpha-L-fucosidase, putative [Thermotoga maritima]
Length = 449
Score = 238 bits (600), Expect = 9e-62
Identities = 136/368 (36%), Positives = 197/368 (52%), Gaps = 34/368 (9%)
Query: 20 QYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFAN----------------GGYAE 63
+Y P W+ + +P W+D KFGIFIH+GIYSVP +A YAE
Sbjct: 7 RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPTGELGKVPMDAWFFQNPYAE 66
Query: 64 WYWWTLKNPSSDGGATQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAKYVV 123
WY +L+ S T YH K +G NF Y+ F F +D EWA + +K+GAKYV+
Sbjct: 67 WYENSLRIKESP---TWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVI 123
Query: 124 LTSKHHEGYTLWNSEQSWNWNSVETGPGIDIVGELTKSVKNMGLHMGLYHSL-FEW---F 179
T+KHH+G+ LW ++ + ++NSV+ GP D+VG+L K+V+ GL G+Y+S +W
Sbjct: 124 PTTKHHDGFCLWGTKYT-DFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFTT 182
Query: 180 NPLYLADAETGKNPTTQVYVDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLS 239
P+ + + P T Y D KQ+ ++V Y P+++W D W + + ++L
Sbjct: 183 EPIRYPEDLSYIRPNTYEYAD-YAYKQVMELVDLYLPDVLWNDMGWPEKGK--EDLKYLF 239
Query: 240 WLYTNSSVKDTVIVNDRWGSECRDKNGGFYTGADHFN-PYKLQSHKWENCATIGYSYGYD 298
Y N + +V NDRWG D F T H N P L +KWE IG S+GY+
Sbjct: 240 AYYYNKHPEGSV--NDRWGVPHWD----FKTAEYHVNYPGDLPGYKWEFTRGIGLSFGYN 293
Query: 299 EYEQATDYQNATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSE 358
E + +L+ LV V+ GGN LL+VGP GTIP+ +RLL +G WL +
Sbjct: 294 RNEGPEHMLSVEQLVYTLVDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGD 353
Query: 359 SIYGSSPW 366
+IYG+S W
Sbjct: 354 AIYGTSVW 361
emb|CAB54164.1| (AL110470) putative glycosyl hydrolase [Streptomyces coelicolor
A3(2)]
Length = 423
Score = 149 bits (372), Expect = 5e-35
Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 50/346 (14%)
Query: 36 WYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGATQRYHEKEFGANFTYQD 95
W+++ K GIF+H+GIYSV +G W + P HE+ Y
Sbjct: 6 WFNEAKLGIFVHYGIYSV----DGVPESWALFDQVVP----------HEQ-------YMR 44
Query: 96 FVSRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSEQSWNWNSVETGPGIDIV 155
+ F FD + WA + ++GA Y VLT++HH+G LW + S T G D+V
Sbjct: 45 QLDGFTAAAFDPSAWAGLFARAGAGYAVLTARHHDGVALWETRLSDLSVVGRTPAGRDLV 104
Query: 156 GELTKSVKNMGLHMGLYHSLFEWFNP------------------LYLADAETGKNPTTQV 197
E ++++ GL GLY+S +W +P Y++ A ++P
Sbjct: 105 AEYVSAMRDRGLRAGLYYSHSDWNHPDYASVRHPRPPHPELVDSPYVSPAPGAEDPRAWE 164
Query: 198 YVDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRW 257
+ Q+++++T + P+L+W DG+W + + W+ +E + DTV +
Sbjct: 165 RYLDYRDGQVRELLTRFGPDLLWFDGEWERSAEQWRMSELARLI--RDLAPDTVCNSRLL 222
Query: 258 GSECRDKNGGFYTGADHFNPYKLQSHKWENCATIGYSYGYDEYEQATDYQNATELIIDLV 317
G G Y + P WE C T+ S+GY Q ++++ +L+
Sbjct: 223 GH-------GDYATPEQGLPMSAPETDWELCLTVNDSWGYRP--QDVNHKSVGQLVRYFA 273
Query: 318 TTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGS 363
T+ GGN LL+VGP A GTI RL +G+W+ +S +++G+
Sbjct: 274 QTIGMGGNLLLNVGPRADGTITPEQAQRLEGLGDWIRRHSAAVHGT 319
gi|1143067 (U29766) alpha-L-fucosidase [Canis familiaris]
Length = 131
Score = 89.7 bits (219), Expect = 4e-17
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
Query: 19 QQYGPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFANGGYAEWYWWTLKNPSSDGGA 78
++Y P W ++SRPLP W+D KFG+F+H+G+++VPA+ +EW+WW K
Sbjct: 36 RRYTPDWQSLDSRPLPDWFDKAKFGVFVHWGVFAVPAWG----SEWFWWHWKGEGLP--Q 89
Query: 79 TQRYHEKEFGANFTYQDFVSRFDCRLFDANEWASIIEKSGAK 120
+++ + + F+Y DF +F R F + WA + + +GA+
Sbjct: 90 YEQFMSENYPPGFSYADFGPQFTARFFHPDTWADLFQAAGAR 131
gi|4063748 (AC005851) unknown protein [Arabidopsis thaliana]
Length = 181
Score = 57.0 bits (135), Expect = 3e-07
Identities = 33/92 (35%), Positives = 50/92 (53%), Gaps = 10/92 (10%)
Query: 98 SRFDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSE------QSWNWNSVETGPG 151
S F+ +A++W I + SG V+LT+KHH+G+ LW SE +S W + G G
Sbjct: 74 SIFNPTHLNASQWVQIAKDSGFSRVILTAKHHDGFCLWPSEYTDYSVKSSQWRN---GAG 130
Query: 152 IDIVGELTKSVKNMGLHMGLYHSLFEWFNPLY 183
D+V EL + K G+ +GLY S ++ Y
Sbjct: 131 -DVVAELASAAKEAGIGLGLYLSPWDRHEQCY 161
gi|4096756 (U39394) alpha-1,3/4-fucosidase precursor [Streptomyces sp.]
Length = 563
Score = 55.8 bits (132), Expect = 7e-07
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 100 FDCRLFDANEWASIIEKSGAKYVVLTSKHHEGYTLWNSEQSWNWNSVETGPGI-DIVGEL 158
F + D ++W + +GA+ V+LT+KHH+G+ L+ S + +SVE PG D+VG
Sbjct: 117 FAPKSIDVDQWMRAYKAAGAEQVMLTAKHHDGFVLYPSR--YTDHSVELSPGSPDVVGAY 174
Query: 159 TKSVKNMGLHMGLYHS 174
K+ + GL +GLY S
Sbjct: 175 VKAARKAGLKVGLYLS 190
gb|AAC33391| (U20246) vrlC [Dichelobacter nodosus]
Length = 875
Score = 38.7 bits (88), Expect = 0.10
Identities = 51/206 (24%), Positives = 72/206 (34%), Gaps = 40/206 (19%)
Query: 209 DIVTTYEPELIWADG-DWMQLSNY--WK---------STEFLSWLYTNSSVKDTVIVNDR 256
DI+ + I+ +G DW Q N+ W +T + W YT VK T V+
Sbjct: 30 DILEVSQGATIFQEGVDWQQSGNHVDWLGSGNEPAIGTTYTVRWTYTKQMVKGTDYVDSG 89
Query: 257 WGSECRDKNGGFY---------TGADHFNPY----------KLQSHKWENCATIGYSYGY 297
W + G Y TG FN ++ W + + GY
Sbjct: 90 WFGQANHPAAGNYFYLVTAYNATGETAFNAAAVIARATAAGEMNKLSW---LPVSGATGY 146
Query: 298 DEYEQA-----TDYQNATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRLLEIGNW 352
Y A TDY+ EL + ++ V G + P A T NM LE+GN
Sbjct: 147 RVYRAATNGARTDYKRLMELGSEALSYVDDGVEEIGTASPPATNTAGLNMSPVQLELGNL 206
Query: 353 LSIN-SESIYGSSPWRVQNMTFNIWY 377
IN G P N + + Y
Sbjct: 207 NVINFGRGSLGDQPVNGSNCSLDYDY 232
pir||I37394 alpha-L-fucosidase - human (fragment) >gi|1335066|emb|CAA25646|
(X01390) alpha-L-fucosidase [Homo sapiens]
Length = 37
Score = 38.3 bits (87), Expect = 0.13
Identities = 17/29 (58%), Positives = 21/29 (71%), Gaps = 2/29 (6%)
Query: 353 LSINSESIYGSSPWRVQ--NMTFNIWYTT 379
LSIN E+IY S PWRVQ T ++WYT+
Sbjct: 1 LSINGEAIYASKPWRVQWEKNTTSVWYTS 29
gb|AAD13302.1| (AF119040) NL0C [Lycopersicon esculentum]
Length = 855
Score = 33.6 bits (75), Expect = 3.4
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 337 TIPNNMVDRLLEIGN------WLSINSESIYGSSPWRV---QNMTFNIWYTTNTTNGNVY 387
++ NN +D LE + W+ ++S S+ G +P V QN+ + ++ ++N NG++
Sbjct: 338 SLGNNNLDGGLEFLSFNTQLEWIDLSSNSLTGPNPSNVSGLQNLEW-LYLSSNNLNGSIP 396
Query: 388 AFVFELPDDGVLILSDPIGNNKTEATLLGLKGEKGVEVSL---PIESTKPGITLN 439
+++F LP ++ + NN + K + VSL +E P LN
Sbjct: 397 SWIFSLPS----LIELDLSNNTFSGKIQDFKSKTLSVVSLRQNQLEGPIPNSLLN 447
gb|AAD36579.1|AE001799_11 (AE001799) sun protein [Thermotoga maritima]
Length = 431
Score = 32.5 bits (72), Expect = 7.6
Identities = 23/73 (31%), Positives = 38/73 (51%), Gaps = 6/73 (8%)
Query: 165 MGLHMGLYHSLFEWFNPLYLADAET---GKNPTTQVYVDEILMKQLKDIVTTYEPELIWA 221
+ L MG Y LF P Y A +ET KN + V+ +L ++L+ + E L+++
Sbjct: 75 VALRMGAYQLLFMNSVPDYAAVSETVKLVKNENFKKLVNAVL-RRLRTVPEPKELHLVYS 133
Query: 222 DGDWMQLSNYWKS 234
+W + NYW+S
Sbjct: 134 HPEW--IVNYWRS 144
emb|CAA22438| (AL034463) tRNA-splicing endonuclease positive effector
[Schizosaccharomyces pombe]
Length = 1944
Score = 32.5 bits (72), Expect = 7.6
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 22 GPTWDQINSRPLPGWYDDVKFGIFIHFGIYSVPAFAN 58
GP + SRP W++D + GI+ F ++ AF+N
Sbjct: 1605 GPNMSAVTSRP---WHEDPQLGIYRFFNVHGTEAFSN 1638
sp|P31327|CPSM_HUMAN CARBAMOYL-PHOSPHATE SYNTHASE [AMMONIA], MITOCHONDRIAL PRECURSOR
(CARBAMOYL-PHOSPHATE SYNTHETASE I) (CPSASE I)
>gi|3228248|emb|CAA75785| (Y15793) carbamoyl phosphate
synthetase 1 [Homo sapiens] >gi|5020420|gb|AAD38072.1|
(AF154830) carbamyl phosphate synthetase I [Homo sapiens]
Length = 1500
Score = 32.5 bits (72), Expect = 7.6
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 12/82 (14%)
Query: 287 NCATIGYSYGYDEYEQATDYQNATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRL 346
NC S +DE ++ + + E I+D+ ACGG ++ VG G IPNN+ L
Sbjct: 1014 NCNPETVSTDFDECDKLYFEELSLERILDIYHQEACGG-CIISVG----GQIPNNLAVPL 1068
Query: 347 LEIGNWLSINSESIYGSSPWRV 368
+ N I G+SP ++
Sbjct: 1069 YK-------NGVKIMGTSPLQI 1083
emb|CAA16319.1| (AL021479) predicted using Genefinder; cDNA EST yk440f2.3 comes
from this gene; cDNA EST yk440f2.5 comes from this gene;
cDNA EST yk550f6.3 comes from this gene [Caenorhabditis
elegans]
Length = 301
Score = 32.5 bits (72), Expect = 7.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Query: 152 IDIVGELTKSVKNMGLHMGLYHSLFEW 178
I+ + ++ +S KN+GL +G+Y S ++W
Sbjct: 174 IEFIQDMIRSAKNLGLSVGIYTSFYDW 200
emb|CAA05275| (AJ002236) Hcr9-9D [Lycopersicon pimpinellifolium]
Length = 866
Score = 32.5 bits (72), Expect = 7.6
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 352 WLSINSESIYGSSPWRVQNMTF--NIWYTTNTTNGNVYAFVFELPDDGVLILSDPIGNNK 409
WL +S S+ G P V + +++ ++N NG++ +++F LP VL LS NN
Sbjct: 366 WLDFSSNSLTGPIPSNVSGLRNLQSLYLSSNYLNGSIPSWIFSLPSLIVLDLS----NNT 421
Query: 410 TEATLLGLKGEKGVEVSL---PIESTKPGITLN 439
+ K + VSL +E P LN
Sbjct: 422 FSGKIQEFKSKTLSAVSLQQNQLEGPIPNSLLN 454
gnl|NCBI_MITO|ND4_11653 NADH dehydrogenase subunit 4 >gi|2499268|sp|Q96068|NU4M_RHIUN
NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4
>gi|1666203|emb|CAA66010| (X97336) NADH subunit 4
[Rhinoceros unicornis]
Length = 459
Score = 32.5 bits (72), Expect = 7.6
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 22/99 (22%)
Query: 175 LFEWFNPLYLADAE--TGKNPTTQ--VYVDEILMKQLKDIVTTYEPELIWADGDWMQLSN 230
L W PL + ++ K P T+ +Y+ ++M QL I+T ELI
Sbjct: 68 LTTWLLPLMIMASQHHLSKEPITRKKLYITMLIMLQLLLIMTFTATELI----------- 116
Query: 231 YWKSTEFLSWLYTNSSVKDTVIVNDRWGSECRDKNGGFY 269
L ++ +++ T+I+ RWG++ N GFY
Sbjct: 117 -------LFYVLFEATLIPTLIIITRWGNQTERLNAGFY 148
sp|P55332|XYN1_EMENI ENDO-1,4-BETA-XYLANASE 1 PRECURSOR (XYLANASE 1) (1,4-BETA-D-XYLAN
XYLANOHYDROLASE 1) >gi|1362522|pir||S57477
endo-1,4-beta-xylanase (EC 3.2.1.8) 1 precursor -
Emericella nidulans >gi|870833|emb|CAA90073| (Z49892)
xylanase [Emericella nidulans]
Length = 225
Score = 32.5 bits (72), Expect = 7.6
Identities = 32/130 (24%), Positives = 50/130 (37%), Gaps = 31/130 (23%)
Query: 179 FNPL---YLADAETGKNPTTQVYVDEILMKQLKDIVTTYEPE-------LIWADGDWMQL 228
FNP YLA +NP + Y+ E TY P +++DG +
Sbjct: 101 FNPSGNGYLAVYGWTQNPLIEYYIVESY--------GTYNPGSGGQHRGTVYSDGATYDI 152
Query: 229 SNYWKSTEFLSWLYTNSSVKDTVIVNDRWGSECRDKNGGFYTGADHFNPY-----KLQSH 283
+ + Y S++ T W + GG T A+HFN + +L +H
Sbjct: 153 --------YTATRYNAPSIEGTATFEQFWSVRQSKRTGGTVTTANHFNAWAALGMRLGTH 204
Query: 284 KWENCATIGY 293
++ AT GY
Sbjct: 205 NYQIVATEGY 214
ref|NP_001866.1|PCPS1| carbamoyl-phosphate synthetase 1, mitochondrial >gi|87018|pir||JQ1348
carbamoyl-phosphate synthase (ammonia) (EC 6.3.4.16)
precursor - human >gi|219553|dbj|BAA14328| (D90282)
carbamyl phosphate synthetase I (EC 6.3.4.16) [Homo
sapiens]
Length = 1500
Score = 32.5 bits (72), Expect = 7.6
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 12/82 (14%)
Query: 287 NCATIGYSYGYDEYEQATDYQNATELIIDLVTTVACGGNFLLDVGPDAQGTIPNNMVDRL 346
NC S +DE ++ + + E I+D+ ACGG ++ VG G IPNN+ L
Sbjct: 1014 NCNPETVSTDFDECDKLYFEELSLERILDIYHQEACGG-CIISVG----GQIPNNLAVPL 1068
Query: 347 LEIGNWLSINSESIYGSSPWRV 368
+ N I G+SP ++
Sbjct: 1069 YK-------NGVKIMGTSPLQI 1083
sp|P28800|A2AP_BOVIN ALPHA-2-ANTIPLASMIN PRECURSOR (ALPHA-2-PLASMIN INHIBITOR)
(ALPHA-2-PI) (ALPHA-2-AP) >gi|631542|pir||S43977
alpha-2-antiplasmin precursor - bovine
>gi|498822|emb|CAA55200| (X78436) alpha-2-antiplasmin
[Bos taurus]
Length = 492
Score = 32.5 bits (72), Expect = 7.6
Identities = 23/83 (27%), Positives = 35/83 (41%), Gaps = 7/83 (8%)
Query: 329 DVGPDAQGTIPNNMVDRLLEIGNWLSINSESIYGSSPWRVQNM------TFNIWYTTNTT 382
D+GP A + + I SE ++G+ P + M N W T
Sbjct: 155 DLGPGAFRLAARMYLQKGFPIKEDFLEQSEQLFGAKPMSLTGMKGEDLANINRW-VKEAT 213
Query: 383 NGNVYAFVFELPDDGVLILSDPI 405
G + F+ +LPDD VL+L + I
Sbjct: 214 EGKIEDFLSDLPDDTVLLLLNAI 236
sp|Q27459|ACE1_CAEBR ACETYLCHOLINESTERASE 1 PRECURSOR (ACHE) >gi|1145810 (U41846)
acetylcholinesterase [Caenorhabditis briggsae]
Length = 620
Score = 32.1 bits (71), Expect = 9.9
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 222 DGDWMQLSNYWKSTEFLSWLYTNSSVKDTVIVNDRWGSECRDKNGGFYTG---------A 272
DG + Q + W +S Y N +V+ + +R G R K F+ A
Sbjct: 516 DGSFTQ--DIWPKYNSVSMEYMNMTVESSYPGQNRIGHGPRRKECAFWKAYLPNLMAAVA 573
Query: 273 DHFNPY---KLQSHKWENCATIGYSYGYDEYEQATDYQNA 309
D +PY K Q KW+N + Y +++Y++ Y+ +
Sbjct: 574 DVGDPYLVWKQQMDKWQNEYITDWQYHFEQYKRYQTYRQS 613
pir||BYEBT sulfate-binding protein - Salmonella typhimurium
Length = 310
Score = 32.1 bits (71), Expect = 9.9
Identities = 36/153 (23%), Positives = 57/153 (36%), Gaps = 31/153 (20%)
Query: 109 EWASIIEKSGAKYVVLTSKHHEGYTLWNSEQSWNW----NSVETGPGIDIVGELTKSVK- 163
+W +I K G V+ + G WN +W + N+ + D V L K+V+
Sbjct: 112 DWNDLI-KPGVS-VITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEV 169
Query: 164 ---------NMGLHMGLYHSLFEWFNPLYLADAETGKN--------------PTTQVYVD 200
N + G+ L W N LA E GK+ PT V VD
Sbjct: 170 LDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSV-VD 228
Query: 201 EILMKQLKDIVTTYEPELIWADGDWMQLSNYWK 233
++ K K + Y L +G + N+++
Sbjct: 229 KVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYR 261
sp|P55334|XYN1_HUMIN ENDO-1,4-BETA-XYLANASE 1 PRECURSOR (XYLANASE 1) (1,4-BETA-D-XYLAN
XYLANOHYDROLASE 1) >gi|631988|pir||S43919 endo xylanase
- Humicola insolens >gi|505261|emb|CAA53632| (X76047)
endo-1,4-beta-xylanase [Humicola insolens]
Length = 227
Score = 32.1 bits (71), Expect = 9.9
Identities = 32/124 (25%), Positives = 46/124 (36%), Gaps = 17/124 (13%)
Query: 178 WFNPL---YLADAETGKNPTTQVYVDEILMKQLKDIVTTYEPELIWADGDWMQLSNYWKS 234
+FNP YLA +NP + YV E Y+ + DGD +
Sbjct: 100 YFNPQGNGYLAVYGWTRNPLVEYYVIESYGTYNPGSQAQYKGTF-YTDGDQYDI------ 152
Query: 235 TEFLSWLYTNSSVKDTVIVNDRWGSECRDKNGGFYTGADHFNPYK-----LQSHKWENCA 289
F+S Y S+ T W + GG +HFN ++ L H ++ A
Sbjct: 153 --FVSTRYNQPSIDGTRTFQQYWSIRKNKRVGGSVNMQNHFNAWQQHGMPLGQHYYQVVA 210
Query: 290 TIGY 293
T GY
Sbjct: 211 TEGY 214
pir||S40860 periplasmic sulphate binding protein - Escherichia coli >gi|305020
(L19201) periplasmic sulphate binding protein
[Escherichia coli] >gi|1790351 (AE000466) periplasmic
sulfate-binding protein [Escherichia coli]
Length = 329
Score = 32.1 bits (71), Expect = 9.9
Identities = 35/154 (22%), Positives = 56/154 (35%), Gaps = 30/154 (19%)
Query: 108 NEWASIIEKSGAKYVVLTSKHHEGYTLWNSEQSWNW----NSVETGPGIDIVGELTKSVK 163
++W +I K G V+ + G WN +W + N+ + D V L K+V+
Sbjct: 129 HDWNDLI-KPGVS-VITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAQDFVRALYKNVE 186
Query: 164 ----------NMGLHMGLYHSLFEWFNPLYLADAETGKN--------------PTTQVYV 199
N + G+ L W N LA E GK+ PT V
Sbjct: 187 VLDSGARGSTNTFVERGIGDVLIAWENEALLAANELGKDKFEIVTPSESILAEPTVSVVD 246
Query: 200 DEILMKQLKDIVTTYEPELIWADGDWMQLSNYWK 233
+ K K++ Y L +G + NY++
Sbjct: 247 KVVEKKGTKEVAEAYLKYLYSPEGQEIAAKNYYR 280
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Nov 15, 1999 3:07 PM
Number of letters in database: 130,475,837
Number of sequences in database: 425,089
Lambda K H
0.317 0.136 0.438
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138654633
Number of Sequences: 425089
Number of extensions: 6538993
Number of successful extensions: 13935
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 13855
Number of HSP's gapped (non-prelim): 35
length of query: 461
length of database: 130,475,837
effective HSP length: 51
effective length of query: 410
effective length of database: 108,796,298
effective search space: 44606482180
effective search space used: 44606482180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 71 (32.1 bits)